Publications

Ben G Weinstein, Ethan White, Sarah J Graves, Stephanie A Bohlman, Aditya Singh (2023). RandCrowns: A Quantitative Metric for Imprecisely Labeled Tree Crown Delineation.

PDF Cite Source Document

Ethan White, Glenda M Yenni, Shawn D Taylor, Erica M Christensen, Ellen K Bledsoe, Juniper L Simonis, Morgan Ernest (2023). Methods in Ecology and Evolution.

Cite

Max Pohlman10 Bansal, Ethan White (2023). Rdataretriever: R Interface to the Data Retriever.

PDF Cite Code Source Document

Ben Weinstein, Ethan White (2023). Counting 50 million trees in the National Ecological Observation Network using airborne deep learning. 2020 ESA Annual Meeting (August 3-6).

PDF Cite Code Dataset Source Document

David J Harris, Shawn D Taylor, Ethan White (2023). Forecasting biodiversity in breeding birds.

Cite

Jonathan P Tennant, Timothée Poisot, M Fabiana Kubke, François Michonneau, Michael P Taylor, Graham Steel, Jérémy Anquetin, Emily Coyte, Benjamin Schwessinger, Erin C McKiernan, others (2023). Open Letter to The American Association for the Advancement of Science. Authorea Preprints.

Cite

Ira Harmon, Sergio Marconi, Ben Weinstein, Yang Bai, Daisy Zhe Wang, Ethan White, Stephanie Bohlman (2023). Improving Rare Tree Species Classification using Domain Knowledge. IEEE Geoscience and Remote Sensing Letters.

PDF Cite Source Document

Nicholas Joshua Clark, Morgan Ernest, Henry Senyondo, Juniper Simonis, Ethan White, Glenda M Yenni, KANK Karunarathna (2023). Forecasting rodent population dynamics and community transitions with dynamic nonlinear models. EcoEvoRxiv.

PDF Cite Code Source Document

Ben G Weinstein, Sergio Marconi, Sarah J Graves, Alina Zare, Aditya Singh, Stephanie A Bohlman, Lukas Magee, Daniel J Johnson, Phillip A Townsend, Ethan White (2023). Capturing long-tailed individual tree diversity using an airborne imaging and a multi-temporal hierarchical model. Remote Sensing in Ecology and Conservation.

PDF Cite Dataset Source Document

Renata M Diaz, Morgan Ernest (2022). Temporal changes in the individual size distribution decouple long-term trends in abundance, biomass, and energy use of North American breeding bird communities. bioRxiv.

PDF Cite Code Dataset Project Source Document

Dylan Stewart, Alina Zare, Sergio Marconi, Ben Weinstein, Ethan White, Sarah Graves, Stephanie Bohlman, Aditya Singh (2022). Sensor Fusion for Superpixel Oversegmentation. Authorea Preprints.

Cite

Juniper L Simonis, Glenda M Yenni, Ellen K Bledsoe, Erica M Christensen, Henry Senyondo, Shawn D Taylor, Hao Ye, Ethan White, Morgan Ernest (2022). portalcasting: Supporting automated forecasting of rodent populations. Journal of Open Source Software.

PDF Cite Code Dataset Project Source Document

Grace J Di Cecco, Sara J Snell Taylor, Ethan White, Allen H Hurlbert (2022). More individuals or specialized niches? Distinguishing support for hypotheses explaining positive species--energy relationships. Journal of Biogeography.

PDF Cite Code Dataset Project Source Document

Renata M Diaz, Morgan Ernest (2022). Maintenance of community function through compensation breaks down over time in a desert rodent community. John Wiley & Sons, Inc. Hoboken, USA.

PDF Cite Source Document

Ira Harmon, Sergio Marconi, Ben Weinstein, Sarah Graves, Daisy Zhe Wang, Alina Zare, Stephanie Bohlman, Aditya Singh, Ethan White (2022). Injecting Domain Knowledge Into Deep Neural Networks for Tree Crown Delineation. IEEE Transactions on Geoscience and Remote Sensing.

PDF Cite Source Document

Morgan Ernest, Hao Ye, Ethan White (2022). Ecological Dynamics and Forecasting: A graduate course on the fundamentals of time series and forecasting in ecology. EcoEvoRxiv.

PDF Cite Code Dataset Source Document

Ethan White, Zachary T Brym, Andrew J Marx, Kristina Riemer, Sergio Marconi, David J Harris, Virnaliz Cruz-Hernández, Morgan Ernest (2022). Data Carpentry for Biologists: A semester long Data Carpentry course using ecological and other biological examples. Journal of Open Source Education.

PDF Cite Project Source Document Code

Sergio Marconi, Ben G Weinstein, Sheng Zou, Stephanie A Bohlman, Alina Zare, Aditya Singh, Dylan Stewart, Ira Harmon, Ashley Steinkraus, Ethan White (2022). Continental-scale hyperspectral tree species classification in the United States National Ecological Observatory Network. Remote Sensing of Environment.

PDF Cite Code Project Source Document

Ben Weinstein, Sergio Marconi, Sarah Graves, Alina Zare, Aditya Singh, Stephanie Bohlman, Lukas Magee, Daniel Johnson, Phillip Townsend, Ethan White (2022). Capturing long-tailed individual tree diversity using an airborne multi-temporal hierarchical model. bioRxiv.

PDF Cite Dataset Source Document

Ben G Weinstein, Lindsey Garner, Vienna R Saccomanno, Ashley Steinkraus, Andrew Ortega, Kristen Brush, Glenda Yenni, Ann E McKellar, Rowan Converse, Christopher D Lippitt, others (2022). A general deep learning model for bird detection in high-resolution airborne imagery. Ecological Applications.

PDF Cite Code Dataset Source Document

Henry Senyondo, Daniel J McGlinn, Pranita Sharma, David J Harris, Hao Ye, Shawn D Taylor, Jeroen Ooms, Francisco Rodrı́guez-Sánchez, Karthik Ram, Apoorva Pandey, others (2021). Rdataretriever: R interface to the data retriever. Journal of Open Source Software.

PDF Cite Code Dataset Project Poster Source Document

Dylan Stewart, Alina Zare, Sergio Marconi, Ben G Weinstein, Ethan White, Sarah J Graves, Stephanie A Bohlman, Aditya Singh (2021). Randcrowns: A quantitative metric for imprecisely labeled tree crown delineation. IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing.

PDF Cite Source Document

Renata M Diaz, Morgan Ernest (2021). Maintenance of community function through compensation breaks down over time in a desert rodent community. bioRxiv.

PDF Cite Code Project Source Document

Cecina Babich Morrow, Morgan Ernest, Andrew J Kerkhoff (2021). Macroevolution of dimensionless life-history metrics in tetrapods. Proceedings of the Royal Society B.

PDF Cite Code Project Source Document

Roel Van Klink, Diana E Bowler, Orr Comay, Michael M Driessen, Morgan Ernest, Alessandro Gentile, Francis Gilbert, Konstantin B Gongalsky, Jennifer Owen, Guy Pe'er, others (2021). InsectChange: a global database of temporal changes in insect and arachnid assemblages.

PDF Cite Source Document

Roel Klink, Diana E Bowler, Orr Comay, Michael M Driessen, SK Ernest, Alessandro Gentile, Francis Gilbert, Konstantin B Gongalsky, Jennifer Owen, Guy Pe'er, others (2021). InsectChange: a global database of temporal changes in insect and arachnid assemblages. Ecology.

PDF Cite Source Document

Juniper L Simonis, Ethan White, Morgan Ernest (2021). Evaluating probabilistic ecological forecasts. Ecology.

PDF Cite Code Dataset Source Document

Sergio Marconi, Sarah J Graves, Ben G Weinstein, Stephanie Bohlman, Ethan White (2021). Estimating individual-level plant traits at scale. Ecological Applications.

PDF Cite Code Dataset Source Document

Renata M Diaz, Hao Ye, Morgan Ernest (2021). Empirical abundance distributions are more uneven than expected given their statistical baseline. Ecology Letters.

PDF Cite Code Project Source Document

Sergio Marconi, Benjamin G Weinstein, Jeremy W Lichstein, Stephanie A Bohlman, Aditya Singh, Ethan White (2021). Disentangling the roles of inter and intraspecific variation on leaf trait distributions across the eastern United States. bioRxiv.

PDF Cite Code Dataset Source Document

Pablo A Cárdenas, Erica Christensen, Morgan Ernest, David C Lightfoot, Robert L Schooley, Paul Stapp, Jennifer A Rudgers (2021). Declines in rodent abundance and diversity track regional climate variability in North American drylands. Global change biology.

PDF Cite Dataset Source Document

Sarah Jane Graves, Sergio Marconi, Dylan Stewart, Ira Harmon, Ben G Weinstein, Yuzi Kanazawa, Victoria M Scholl, Maxwell B Joseph, Joseph McClinchy, Luke Browne, others (2021). Data science competition for cross-site delineation and classification of individual trees from airborne remote sensing data. bioRxiv.

PDF Cite Code Dataset Project Source Document

Ben G Weinstein, Sergio Marconi, Stephanie A Bohlman, Alina Zare, Aditya Singh, Sarah J Graves, Ethan White (2021). A remote sensing derived data set of 100 million individual tree crowns for the National Ecological Observatory Network. Elife.

PDF Cite Code Dataset Source Document

Ben G Weinstein, Lindsey Gardner, Vienna Saccomanno, Ashley Steinkraus, Andrew Ortega, Kristen Brush, Glenda Yenni, Ann E McKellar, Rowan Converse, Christopher Lippitt, others (2021). A general deep learning model for bird detection in high resolution airborne imagery. bioRxiv.

PDF Cite Code Dataset Source Document

Ben G Weinstein, Sarah J Graves, Sergio Marconi, Aditya Singh, Alina Zare, Dylan Stewart, Stephanie A Bohlman, Ethan White (2021). A benchmark dataset for canopy crown detection and delineation in co-registered airborne RGB, LiDAR and hyperspectral imagery from the National Ecological Observation Network. PLoS computational biology.

PDF Cite Code Dataset Source Document

Morgan Ernest, Glenda M Yenni, Ginger Allington, Ellen K Bledsoe, Erica M Christensen, Renata M Diaz, Keith Geluso, Jacob R Goheen, Qinfeng Guo, Edward Heske, others (2020). The Portal Project: a long-term study of a Chihuahuan desert ecosystem. BioRxiv.

PDF Cite Dataset Project Source Document

Kevin R Burgio, Caitlin McDonough MacKenzie, Stephanie B Borrelle, Morgan Ernest, Jacquelyn L Gill, Kurt E Ingeman, Amy Teffer, Ethan White (2020). Ten simple rules for a successful remote postdoc. PLoS Computational Biology.

PDF Cite Source Document

Ben G Weinstein, Sergio Marconi, Stephanie Bohlman, Alina Zare, Aditya Singh, Sarah J Graves, Ethan White (2020). NEON Crowns: a remote sensing derived dataset of 100 million individual tree crowns. BioRxiv.

PDF Cite Code Dataset Source Document

Thomas Koffel, Colin T Kremer, K Bannar-Martin, Morgan Ernest, Nico Eisenhauer, Christiane Roscher, Juliano Sarmento Cabral, Mathew A Leibold (2020). Modeling how community assembly alters the functioning of ecosystems. bioRxiv.

PDF Cite Source Document

Peter B Adler, Ethan White, Michael H Cortez (2020). Matching the forecast horizon with the relevant spatial and temporal processes and data sources. Ecography.

PDF Cite Source Document

Shawn D Taylor, Ethan White (2020). Influence of climate forecasts, data assimilation, and uncertainty propagation on the performance of near-term phenology forecasts. bioRxiv.

PDF Cite Code Dataset Source Document

Peter Adler, Ethan White, Michael Cortez (2020). Developing theory about the predictability of nature: What, where, when and how?. 2020 ESA Annual Meeting (August 3-6).

Cite

Ben G Weinstein, Sergio Marconi, Mélaine Aubry-Kientz, Gregoire Vincent, Henry Senyondo, Ethan White (2020). DeepForest: A Python package for RGB deep learning tree crown delineation. Methods in Ecology and Evolution.

PDF Cite Dataset Source Document

Ben G Weinstein, Sergio Marconi, Stephanie A Bohlman, Alina Zare, Ethan White (2020). Cross-site learning in deep learning RGB tree crown detection. Ecological Informatics.

PDF Cite Code Dataset Source Document

Shawn D Taylor, Ethan White (2020). Automated data-intensive forecasting of plant phenology throughout the United States. Ecological Applications.

PDF Cite Code Dataset Source Document

Sara Snell Taylor, Jessica R Coyle, Ethan White, Allen H Hurlbert (2020). A simulation study of the use of temporal occupancy for identifying core and transient species. Plos one.

PDF Cite Dataset Source Document

Ben G Weinstein, Sarah J Graves, Sergio Marconi, Aditya Singh, Alina Zare, Dylan Stewart, Stephanie A Bohlman, Ethan White (2020). A benchmark dataset for individual tree crown delineation in co-registered airborne RGB, LiDAR and hyperspectral imagery from the National Ecological Observation Network. bioRxiv.

PDF Cite Code Dataset Source Document

Ellen K Bledsoe, Morgan Ernest (2019). Temporal changes in species composition affect a ubiquitous species’ use of habitat patches.

PDF Cite Code Dataset Source Document

Erica M Christensen, Glenda M Yenni, Hao Ye, Juniper L Simonis, Ellen K Bledsoe, Renata Diaz, Shawn D Taylor, Ethan White, Morgan Ernest (2019). portalr: an R package for summarizing and using the Portal Project Data. Journal of Open Source Software.

PDF Cite Source Document

Daniel M Perkins, Andrea Perna, Rita Adrian, Pedro Cermeño, Ursula Gaedke, Marı́a Huete-Ortega, Ethan White, Gabriel Yvon-Durocher, Daniel L Rabosky, Marta Coll, others (2019). Ocean Science for a Healthy Planet. Nature Communications.

Cite

Hyun Choi, Ali Sadeghian, Sergio Marconi, Ethan White, Daisy Zhe Wang (2019). Measuring impact of climate change on tree species: analysis of jsdm on fia data. arXiv preprint arXiv:1910.04932.

PDF Cite Source Document

S Kathleen Lyons, Felisa A Smith, Morgan Ernest (2019). Macroecological patterns of mammals across taxonomic, spatial, and temporal scales. Journal of Mammalogy.

PDF Cite Source Document

Peter Brown, Aik-Choon Tan, Mohamed A El-Esawi, Thomas Liehr, Oliver Blanck, Douglas P Gladue, Gabriel MF Almeida, Tomislav Cernava, Carlos O Sorzano, Andy WK Yeung, others (2019). Large expert-curated database for benchmarking document similarity detection in biomedical literature search. Database.

PDF Cite Dataset Source Document

Ben G Weinstein, Sergio Marconi, Stephanie Bohlman, Alina Zare, Ethan White (2019). Individual tree-crown detection in RGB imagery using semi-supervised deep learning neural networks. Remote Sensing.

PDF Cite Source Document

Kari EA Norman, Ethan White (2019). Hotspot prioritizations show sensitivity to data type. BioRxiv.

PDF Cite Code Dataset Source Document

Ben G Weinstein, Sergio Marconi, Stephanie A Bohlman, Alina Zare, Ethan White (2019). Geographic generalization in airborne RGB deep learning tree detection. bioRxiv.

PDF Cite Code Dataset Source Document

Erica M Christensen, Gavin L Simpson, Morgan Ernest (2019). Established rodent community delays recovery of dominant competitor following experimental disturbance. Proceedings of the Royal Society B.

PDF Cite Code Source Document

Daniel M Perkins, Andrea Perna, Rita Adrian, Pedro Cermeño, Ursula Gaedke, Maria Huete-Ortega, Ethan White, Gabriel Yvon-Durocher (2019). Energetic equivalence underpins the size structure of tree and phytoplankton communities. Nature communications.

PDF Cite Code Dataset Source Document

Ethan White, Glenda M Yenni, Shawn D Taylor, Erica M Christensen, Ellen K Bledsoe, Juniper L Simonis, Morgan Ernest (2019). Developing an automated iterative near-term forecasting system for an ecological study. Methods in Ecology and Evolution.

PDF Cite Code Dataset Source Document

Glenda M Yenni, Erica M Christensen, Ellen K Bledsoe, Sarah R Supp, Renata M Diaz, Ethan White, Morgan Ernest (2019). Developing a modern data workflow for regularly updated data. PLoS Biology.

PDF Cite Dataset Source Document

Jean François Michonneau, Tracy Teal, Auriel Fournier, Brian Seok, Adam Obeng, Aleksandra Natalia Pawlik, Ana Costa Conrado, Kara Woo, Philip Lijnzaad, Ted Hart, others (2019). datacarpentry/R-ecology-lesson: Data Carpentry: Data Analysis and Visualization in R for Ecologists, June 2019.

Cite Code Dataset Source Document

Shawn D Taylor, Joan M Meiners, Kristina Riemer, Michael C Orr, Ethan White (2019). Comparison of large-scale citizen science data and long-term study data for phenology modeling. Ecology.

PDF Cite Code Dataset Source Document

Sergio Marconi, Sarah J Graves, Dihong Gong, Morteza Shahriari Nia, Marion Le Bras, Bonnie J Dorr, Peter Fontana, Justin Gearhart, Craig Greenberg, Dave J Harris, others (2019). A data science challenge for converting airborne remote sensing data into ecological information. PeerJ.

PDF Cite Code Dataset Source Document

Kristina Riemer, Narayani Barve, Brian Stucky, Stephen J Mayor, Robert P Guralnick, Ethan White (2018). Weak impacts of climatic factors on intraspecific body size variation in endothermic species. 2018 ESA Annual Meeting (August 5–10).

Cite Source Document

Molly F Jenkins, Ethan White, Allen H Hurlbert (2018). The proportion of core species in a community varies with spatial scale and environmental heterogeneity. PeerJ.

Cite Dataset Project Source Document

Sara J Snell Taylor, Brian S Evans, Ethan White, Allen H Hurlbert (2018). The prevalence and impact of transient species in ecological communities. Ecology.

PDF Cite Code Dataset Project Source Document

Morgan Ernest, Glenda M Yenni, Ginger Allington, Ellen K Bledsoe, Erica M Christensen, Renata M Diaz, Keith Geluso, Jacob R Goheen, Qinfeng Guo, Edward Heske, others (2018). The Portal Project: a long-term study of a Chihuahuan desert ecosystem. BioRxiv.

PDF Cite Dataset Project Source Document

Morgan Ernest (2018). Scales of data. Nature Ecology & Evolution.

PDF Cite Source Document

Zachary T Brym, Morgan Ernest (2018). Process-based allometry describes the influence of management on orchard tree aboveground architecture. PeerJ.

PDF Cite Source Document

Juniper L Simonis, Glenda M Yenni, Shawn D Taylor, Erica Christensen, Ellen K Bledsoe, Ethan White, Morgan Ernest (2018). Prediction and forecasting of portal fauna via particle filtration. 2018 ESA Annual Meeting (August 5–10).

Cite

Kristina Riemer, Robert P Guralnick, Ethan White (2018). No general relationship between mass and temperature in endothermic species. Elife.

PDF Cite Dataset Source Document

Wendy Gram, Sharon K Collinge, Robert Guralnick, Ethan White, Michael Kaspari, Ankur R Desai, Anna K Monfils, Cayelan Carey, Kate Thibault, Claire K Lunch, others (2018). NEON Resources for Your Research. 2018 ESA Annual Meeting (August 5–10).

Cite Source Document

Erica M Christensen, David J Harris, Morgan Ernest (2018). Long-term community change through multiple rapid transitions in a desert rodent community.

PDF Cite Code Dataset Project Source Document

Michael C Dietze, Andrew Fox, Lindsay M Beck-Johnson, Julio L Betancourt, Mevin B Hooten, Catherine S Jarnevich, Timothy H Keitt, Melissa A Kenney, Christine M Laney, Laurel G Larsen, others (2018). Iterative near-term ecological forecasting: Needs, opportunities, and challenges. Proceedings of the National Academy of Sciences.

PDF Cite Source Document

Katherine H Bannar-Martin, Colin T Kremer, Morgan Ernest, Mathew A Leibold, Harald Auge, Jonathan Chase, Steven AJ Declerck, Nico Eisenhauer, Stanley Harpole, Helmut Hillebrand, others (2018). Integrating community assembly and biodiversity to better understand ecosystem function: the Community Assembly and the Functioning of Ecosystems (CAFE) approach. Ecology Letters.

PDF Cite Code Dataset

David J Harris, Shawn D Taylor, Ethan White (2018). Forecasting biodiversity in breeding birds using best practices. PeerJ.

PDF Cite Code Dataset Source Document

Shawn D Taylor, Ethan White (2018). Evaluating a near term ecological forecast of plant phenology. 2018 ESA Annual Meeting (August 5–10).

PDF Cite Poster Source Document

Ethan White, Glenda M Yenni, Shawn D Taylor, Erica M Christensen, Ellen K Bledsoe, Juniper L Simonis, Morgan Ernest (2018). Developing an automated iterative near-term forecasting system for an ecological study. bioRxiv.

PDF Cite Code Dataset Source Document

Kristina Riemer, Kristina J Anderson-Teixeira, Felisa A Smith, David J Harris, Morgan Ernest (2018). Body size shifts influence effects of increasing temperatures on ectotherm metabolism. Global Ecology and Biogeography.

PDF Cite Source Document

Maria Dornelas, Laura H Antao, Faye Moyes, Amanda E Bates, Anne E Magurran, Dušan Adam, Asem A Akhmetzhanova, Ward Appeltans, Jose Manuel Arcos, Haley Arnold, others (2018). BioTIME: A database of biodiversity time series for the Anthropocene. Global Ecology and Biogeography.

PDF Cite Dataset Project Source Document

Sara Snell, Brian Evans, Ethan White, Allen Hurlbert (2017). The prevalence and impact of transient species in ecological communities. bioRxiv.

PDF Cite Code Dataset Project Source Document

Alison Appling, Sean Aubin, Pete Bachant, Scott Bailey, Daniel Baird, Pauline Barmby, Bérénice Batut, Maxim Belkin, Ben Bolker, Madeleine Bonsma, others (2017). Software Carpentry: version control with Git.

Cite Code Source Document

Stephanie E Hampton, Matthew B Jones, Leah A Wasser, Mark P Schildhauer, Sarah R Supp, Julien Brun, Rebecca R Hernandez, Carl Boettiger, Scott L Collins, Louis J Gross, others (2017). Skills and knowledge for data-intensive environmental research. BioScience.

PDF Cite Project Source Document

Henry Senyondo, Benjamin D Morris, Akash Goel, Andrew Zhang, Akshay Narasimha, Shivam Negi, David J Harris, D Gertrude Digges, Kapil Kumar, Amritanshu Jain, others (2017). Retriever: Data retrieval tool. The Journal of Open Source Software.

PDF Cite Code Dataset Project Source Document

Glenda Yenni, Peter B Adler, Morgan Ernest (2017). Do persistent rare species experience stronger negative frequency dependence than common species?. Global Ecology and Biogeography.

PDF Cite Source Document

Mathew A Leibold, Jonathan M Chase, Morgan Ernest (2017). Community assembly and the functioning of ecosystems: how metacommunity processes alter ecosystems attributes. Ecology.

PDF Cite Source Document

Kristina Riemer, Kristina J Anderson-Teixeira, Felisa A Smith, David J Harris, Morgan Ernest (2017). Body size shifts influence effects of increasing temperatures on ectotherm metabolism. bioRxiv.

PDF Cite Project Source Document

Joan M Meiners, Terry L Griswold, David J Harris, Morgan Ernest (2017). Bees without flowers: before peak bloom, diverse native bees find insect-produced honeydew sugars. The American Naturalist.

PDF Cite Code Slides Source Document

S.K. Morgan Ernest, Glenda M. Yenni, Ginger Allington, Erica M Christensen, Keith Geluso, Jacob R Goheen, Michelle R Schutzenhofer, Sarah R. Supp, Katherine M. Thibault, James H Brown, others (2016). Long-term monitoring and experimental manipulation of a Chihuahuan desert ecosystem near Portal, Arizona (1977--2013). Ecology.

PDF Cite Dataset Source Document

Mike Dietze, Andrew Fox, Julio L Betancourt, Mevin Hooten, Catherine S Jarnevich, Tim H Keitt, Melissa Kenney, Christine Laney, Laurel Larsen, Henry W Loescher, others (2016). Iterative ecological forecasting: needs, opportunities, and challenges. NEON Workshop: Operationalizing Ecological Forecasting.

PDF Cite Source Document

KAS Mislan, Jeffrey M Heer, Ethan White (2016). Elevating the status of code in ecology. Trends in ecology & evolution.

PDF Cite Code Dataset Project Source Document

Ethan White (2016). Data Management Plan for Moore Investigator in Data Driven Discovery Grant. Research Ideas and Outcomes.

PDF Cite

Xiao Xiao, James P O'Dwyer, Ethan White (2016). Comparing process-based and constraint-based approaches for modeling macroecological patterns. Ecology.

PDF Cite Source Document

Elita Baldridge, David J Harris, Xiao Xiao, Ethan White (2016). An extensive comparison of species-abundance distribution models. PeerJ.

PDF Cite Code Dataset Source Document

Sarah R Supp, David N. Koons, S.K. Morgan Ernest (2015). Using life history trade-offs to understand core-transient structuring of a small mammal community. Ecosphere.

PDF Cite Code Dataset Source Document

Ethan White (2015). Some thoughts on best publishing practices for scientific software. Ideas in Ecology and Evolution.

PDF Cite Source Document

DJ McGlinn, Xiao Xiao, Justin Kitzes, Ethan White (2015). Exploring the spatially explicit predictions of the Maximum Entropy Theory of Ecology. Global Ecology and Biogeography.

PDF Cite Source Document

Tracy K Teal, Karen A Cranston, Hilmar Lapp, Ethan White, Greg Wilson, Karthik Ram, Aleksandra Pawlik (2015). Data carpentry: workshops to increase data literacy for researchers.

PDF Cite Source Document

Ethan White (2015). Comparing snapshot methods, time series analysis, and simple bench marks for forecasting biodiversity. figshare.

PDF Cite Dataset Source Document

Nathan P Myhrvold, Elita Baldridge, Benjamin Chan, Dhileep Sivam, Daniel L Freeman, Morgan Ernest (2015). An amniote life-history database to perform comparative analyses with birds, mammals, and reptiles: Ecological Archives E096-269. Ecology.

PDF Cite Dataset Source Document

Xiao Xiao, Daniel J McGlinn, Ethan White (2015). A strong test of the maximum entropy theory of ecology. The American Naturalist.

PDF Cite Source Document

Xiao Xiao, Kenneth J Locey, Ethan White (2015). A process-independent explanation for the general form of Taylor’s law. The American Naturalist.

PDF Cite Source Document

Sarah R Supp, Morgan Ernest (2014). Species-level and community-level responses to disturbance: a cross-community analysis. Ecology.

PDF Cite Code Dataset Source Document

Juha J Saarinen, Alison G Boyer, James H Brown, Daniel P Costa, Morgan Ernest, Alistair R Evans, Mikael Fortelius, John L Gittleman, Marcus J Hamilton, Larisa E Harding, others (2014). Patterns of maximum body size evolution in Cenozoic land mammals: eco-evolutionary processes and abiotic forcing. Proceedings of the Royal Society B: Biological Sciences.

PDF Cite Dataset Source Document

Jonathan P Tennant, Timothée Poisot, M Fabiana Kubke, François Michonneau, Michael P Taylor, Graham Steel, Jérémy Anquetin, Emily Coyte, Benjamin Schwessinger, Erin C McKiernan, others (2014). Open Letter to The American Association for the Advancement of Science. The Winnower.

Cite

Morgan Ernest, Ethan White (2014). Macroecology before Macroecology. Foundations of Macroecology: Classic Papers with Commentaries.

PDF Cite Source Document

Greg Wilson, Dhavide A Aruliah, C Titus Brown, Neil P Chue Hong, Matt Davis, Richard T Guy, Steven HD Haddock, Kathryn D Huff, Ian M Mitchell, Mark D Plumbley, others (2014). Best practices for scientific computing. PLoS biology.

PDF Cite Source Document

Morgan Ernest (2013). Using size distributions to understand the role of body size in mammalian community assembly. Animal body size: linking pattern and process across space, time, and taxonomic group. University of Chicago Press, Chicago, Illinois, USA.

PDF Cite Source Document

Benjamin D Morris, Ethan White (2013). The EcoData retriever: improving access to existing ecological data. PloS one.

PDF Cite Code Dataset Project Source Document

Philippe Desjardins-Proulx, Ethan White, Joel J Adamson, Karthik Ram, Timothée Poisot, Dominique Gravel (2013). The case for open preprints in biology. PLoS Biology.

PDF Cite Source Document

Jessica R Coyle, Allen H Hurlbert, Ethan White (2013). Opposing mechanisms drive richness patterns of core and transient bird species. The American Naturalist.

PDF Cite Source Document

Ethan White, Elita Baldridge, Zachary T Brym, Kenneth J Locey, Daniel J McGlinn, Sarah R Supp (2013). Nine simple ways to make it easier to (re) use your data. Ideas in Ecology and Evolution.

PDF Cite Source Document

Ginger RH Allington, David N Koons, Morgan Ernest, Michele R Schutzenhofer, Thomas J Valone (2013). Niche opportunities and invasion dynamics in a desert annual community. Ecology Letters.

PDF Cite Dataset Project Source Document

George A Cushen, Mark S Nixon (2013). Mobile visual clothing search. IEEE International Conference on Multimedia and Expo Workshops.

Cite

Kenneth J Locey, Ethan White (2013). How species richness and total abundance constrain the distribution of abundance. Ecology letters.

PDF Cite Source Document

Jordan G Okie, Alison G Boyer, James H Brown, Daniel P Costa, Morgan Ernest, Alistair R Evans, Mikael Fortelius, John L Gittleman, Marcus J Hamilton, Larisa E Harding, others (2013). Effects of allometry, productivity and lifestyle on rates and limits of body size evolution. Proceedings of the Royal Society B: Biological Sciences.

PDF Cite Source Document

Ethan White, Elita Baldridge, Zachary T Brym, Kenneth J Locey, Daniel J McGlinn, Sarah R Supp (2013). Data Sharing in Ecology and Evolution. IDEAS iN ECOlOGy AND EvOlUTiON.

PDF Cite Source Document

Greg Wilson, DA Aruliah, C Titus Brown, Neil P Chue Hong, Matt Davis, Richard T Guy, Steven HD Haddock, Katy Huff, Ian M Mitchell, Mark Plumbley, others (2013). Best practices for scientific computing.

PDF Cite Source Document

Daniel J McGlinn, Xiao Xiao, Ethan White (2013). An empirical evaluation of four variants of a universal species--area relationship. PeerJ.

PDF Cite Code Dataset Source Document

Alistair R Evans, David Jones, Alison G Boyer, James H Brown, Daniel P Costa, Morgan Ernest, Erich MG Fitzgerald, Mikael Fortelius, John L Gittleman, Marcus J Hamilton, others (2012). The maximum rate of mammal evolution. Proceedings of the National Academy of Sciences.

PDF Cite Code Project Source Document

Glenda Marie Yenni, Peter Adler, Morgan Ernest (2012). Strong self-limitation promotes the persistence of rare species. Ecology.

PDF Cite Source Document

Ethan White, Xiao Xiao, Nick JB Isaac, Richard M Sibly (2012). Methodological tools. Metabolic ecology: a scaling approach.

PDF Cite Source Document

Kristina J Anderson-Teixeira, Felisa A Smith, S.K. Morgan Ernest (2012). Climate Change. Metabolic Ecology: A Scaling Approach.

Cite Source Document

Ethan White, Kate Thibault, Xiao Xiao (2012). Characterizing species abundance distributions across taxa and ecosystems using a simple maximum entropy model. Ecology.

PDF Cite Code Dataset Source Document

SR Supp, X Xiao, SKM Ernest, EP White (2012). An experimental test of the response of macroecological patterns to altered species interactions. Ecology.

PDF Cite Code Dataset Source Document

James C Stegen, Nathan G Swenson, Brian J Enquist, Ethan White, Oliver L Phillips, Peter M Jørgensen, Michael D Weiser, Abel Monteagudo Mendoza, Percy Núñez Vargas (2011). Variation in above-ground forest biomass across broad climatic gradients. Global Ecology and Biogeography.

PDF Cite Source Document

Kate Thibault, Sarah R Supp, Mikaelle Giffin, Ethan White, Morgan Ernest (2011). Species composition and abundance of mammalian communities. Ecology.

PDF Cite Code Dataset Source Document

Kenneth J Locey, Ethan White (2011). Simple structural differences between coding and noncoding DNA. PLoS One.

PDF Cite Dataset Source Document

Xiao Xiao, Ethan White, Mevin B Hooten, Susan L Durham (2011). On the use of log-transformation vs. nonlinear regression for analyzing biological power laws. Ecology.

PDF Cite Source Document

Kate Thibault, Ethan White, Allen H Hurlbert, Morgan Ernest (2011). Multimodality in the individual size distributions of bird communities. Global Ecology and Biogeography.

PDF Cite Source Document

Katherine M. Thibault, Ethan P. White, Allen H. Hurlbert, S. K. Morgan Ernest (2011). Multimodality in the individual size distributions of bird communities. Global Ecology and Biogeography.

PDF Cite Source Document DOI

Felisa A Smith, Alison G Boyer, James H Brown, Daniel P Costa, Tamar Dayan, Morgan Ernest, Alistair R Evans, Mikael Fortelius, John L Gittleman, Marcus J Hamilton, others (2010). The evolution of maximum body size of terrestrial mammals. science.

PDF Cite Dataset Source Document

Ethan White, Allen H Hurlbert (2010). The combined influence of the local environment and regional enrichment on bird species richness. The American Naturalist.

PDF Cite Source Document

Kate Thibault, Morgan Ernest, James H Brown (2010). Redundant or complementary? Impact of a colonizing species on community structure and function. Oikos.

PDF Cite Source Document

Sarah R Supp, Ethan White (2010). Measures of journal quality should separate reviews from original research. Ideas in Ecology and Evolution.

PDF Cite Source Document

Kate Thibault, Morgan Ernest, Ethan White, James H Brown, Jacob R Goheen (2010). Long-term insights into the influence of precipitation on community dynamics in desert rodents. Journal of Mammalogy.

PDF Cite Source Document

Ethan White, Morgan Ernest, Peter B Adler, Allen H Hurlbert, S Kathleen Lyons (2010). Integrating spatial and temporal approaches to understanding species richness. Philosophical Transactions of the Royal Society B: Biological Sciences.

PDF Cite Source Document

KM Thibault, SK Ernest, Ethan White, JH Brown, JR Goheen (2010). Complex dynamics of rodent response to precipitation in the Chihuahuan Desert. Journal of Mammalogy.

PDF Cite Source Document

Ethan White, Allen H Hurlbert (2009). The combined influence of the local environment and regional enrichment on bird species richness. The American Naturalist.

PDF Cite Source Document

Hélène Morlon, Ethan White, Rampal S Etienne, Jessica L Green, Annette Ostling, David Alonso, Brian J Enquist, Fangliang He, Allen Hurlbert, Anne E Magurran, others (2009). Taking species abundance distributions beyond individuals. Ecology Letters.

PDF Cite Source Document

Morgan Ernest, Thomas J Valone, James H Brown (2009). Long-term monitoring and experimental manipulation of a Chihuahuan Desert ecosystem near Portal, Arizona, USA: Ecological Archives E090-118. Ecology.

PDF Cite Dataset Source Document

Charles A Price, Kiona Ogle, Ethan White, Joshua S Weitz (2009). Evaluating scaling models in biology using hierarchical Bayesian approaches. Ecology letters.

PDF Cite Source Document

Morgan Ernest, Ethan White, James H Brown (2009). Changes in a tropical forest support metabolic zero-sum dynamics. Ecology Letters.

PDF Cite Source Document

Morgan Ernest, James H Brown, Kate Thibault, Ethan White, Jacob R Goheen (2008). Zero sum, the niche, and metacommunities: long-term dynamics of community assembly. The American Naturalist.

PDF Cite Slides Source Document

James C Stegen, Ethan White (2008). On the relationship between mass and diameter distributions in tree communities. Ecology Letters.

PDF Cite Source Document

Ethan White, Brian J Enquist, Jessica L Green (2008). On estimating the exponent of power-law frequency distributions. Ecology.

PDF Cite Source Document

Felisa A Smith, S Kathleen Lyons, Morgan Ernest, James H Brown (2008). Macroecology: more than the division of food and space among species on continents. Progress in Physical Geography.

PDF Cite Source Document

S.K. Morgan Ernest (2008). Homeostasis. The Encyclopedia of Ecology.

Cite

Mauricio Lima, Morgan Ernest, James H Brown, Andrea Belgrano, Nils Chr Stenseth (2008). Chihuahuan Desert kangaroo rats: nonlinear effects of population dynamics, competition, and rainfall. Ecology.

PDF Cite Source Document

Brian J McGill, Rampal S Etienne, John S Gray, David Alonso, Marti J Anderson, Habtamu Kassa Benecha, Maria Dornelas, Brian J Enquist, Jessica L Green, Fangliang He, others (2007). Species abundance distributions: moving beyond single prediction theories to integration within an ecological framework. Ecology letters.

PDF Cite Source Document

Ethan White (2007). Spatiotemporal scaling of species richness: patterns, processes andimplications. ScalingBiodiversity.

PDF Cite Source Document

Ethan White, Morgan Ernest, Andrew J Kerkhoff, Brian J Enquist (2007). Relationships between body size and abundance in ecology. Trends in ecology & evolution.

PDF Cite Source Document

Ethan White, Michael A Gilchrist (2007). Effects of population-level aggregation, autocorrelation, and interspecific association on the species--time relationship in two desert communities. Evolutionary Ecology Research.

PDF Cite Source Document

Allen H Hurlbert, Ethan White (2007). Ecological correlates of geographical range occupancy in North American birds. Global Ecology and Biogeography.

PDF Cite Source Document

JE Houlahan, DJ Currie, K Cottenie, GS Cumming, SKM Ernest, CS Findlay, SD Fuhlendorf, U Gaedke, P Legendre, JJ Magnuson, others (2007). Compensatory dynamics are rare in natural ecological communities. Proceedings of the National Academy of Sciences.

PDF Cite Source Document

Craig R McClain, Ethan White, Allen H Hurlbert (2007). Challenges in the application of geometric constraint models. Global Ecology and Biogeography.

PDF Cite Source Document

Eric L Charnov, Morgan Ernest (2006). The offspring-size/clutch-size trade-off in mammals. The American Naturalist.

PDF Cite Source Document

Jacob R Goheen, Ethan White, Morgan Ernest, James H Brown (2006). Intra-guild compensation regulates species richness in desert rodents: reply. Ecology.

PDF Cite Source Document

Van M Savage, Ethan White, Melanie E Moses, Morgan Ernest, Brian J Enquist, Eric L Charnov (2006). Comment on "The illusion of invariant quantities in life histories". Science.

Cite Source Document

Ethan White, Peter B Adler, William K Lauenroth, Richard A Gill, David Greenberg, Dawn M Kaufman, Andrew Rassweiler, James A Rusak, Melinda D Smith, John R Steinbeck, others (2006). A comparison of the species--time relationship across ecosystems and taxonomic groups. Oikos.

PDF Cite Source Document

Ethan White, James H Brown (2005). The template: patterns and processes of spatial variation. Ecosystem function in heterogeneous landscapes.

PDF Cite Source Document

Jacob R Goheen, Ethan White, Morgan Ernest, James H Brown (2005). Intra-guild compensation regulates species richness in desert rodents. Ecology.

PDF Cite Source Document

Peter B Adler, Ethan White, William K Lauenroth, Dawn M Kaufman, Andrew Rassweiler, James A Rusak (2005). Evidence for a general species--time--area relationship. Ecology.

PDF Cite Dataset Source Document

Dov F Sax, James H Brown, Ethan White, Steven D Gaines (2005). Dynamics of species invasions: Insights into the mechanisms that limit species diversity. Sinauer Associates.

Cite Source Document

Allen H Hurlbert, Ethan White (2005). Disparity between range map-and survey-based analyses of species richness: patterns, processes and implications. Ecology Letters.

PDF Cite Source Document

Morgan Ernest (2005). Body size, energy use, and community structure of small mammals. Ecology.

PDF Cite Source Document

S Kathleen Lyons, Felisa A Smith, Peter J Wagner, Ethan White, James H Brown (2004). Was a ‘hyperdisease’responsible for the late Pleistocene megafaunal extinction?. Ecology Letters.

PDF Cite Source Document

Ethan White (2004). Two-phase species--time relationships in North American land birds. Ecology Letters.

PDF Cite Source Document

Ethan White, Morgan Ernest, Kate Thibault (2004). Trade-offs in community properties through time in a desert rodent community. The American Naturalist.

PDF Cite Source Document

Katherine M. Thibault, Ethan P. White, S. K. Morgan Ernest (2004). Temporal Dynamics in the Structure and Composition of a Desert Rodent Community. Ecology.

PDF Cite Code Dataset Source Document

Kate Thibault, Ethan White, Morgan Ernest (2004). Temporal dynamics in the structure and composition of a desert rodent community. Ecology.

PDF Cite Source Document

Felisa A Smith, James H Brown, John P Haskell, S Kathleen Lyons, John Alroy, Eric L Charnov, Tamar Dayan, Brian J Enquist, Morgan Ernest, Elizabeth A Hadly, others (2004). Similarity of mammalian body size across the taxonomic hierarchy and across space and time. The American Naturalist.

PDF Cite Project Slides Source Document

Brian A Maurer, James H Brown, Tamar Dayan, Brian J Enquist, Morgan Ernest, Elizabeth A Hadly, John P Haskell, David Jablonski, Kate E Jones, Dawn M Kaufman, others (2004). Similarities in body size distributions of small-bodied flying vertebrates. Evolutionary Ecology Research.

PDF Cite Source Document

Peter Chesson, Renate LE Gebauer, Susan Schwinning, Nancy Huntly, Kerstin Wiegand, Morgan SK Ernest, Anna Sher, Ariel Novoplansky, Jake F Weltzin (2004). Resource pulses, species interactions, and diversity maintenance in arid and semi-arid environments. Oecologia.

PDF Cite Source Document

Ethan White (2004). Factors affecting bat house occupancy in Colorado. The Southwestern Naturalist.

PDF Cite Source Document

JH Brown, EJ Bedrick, SKM Ernest, JLE Cartron, JF Kelly (2004). Constraints on negative relationships: mathematical causes and ecological consequences. The nature of scientific evidence, ML Taper and SR Lele (eds.). University of Chicago Press, Chicago, Illinois.

PDF Cite Source Document

Morgan Ernest, Brian J Enquist, James H Brown, Eric L Charnov, James F Gillooly, Van M Savage, Ethan White, Felisa A Smith, Elizabeth A Hadly, John P Haskell, others (2003). Thermodynamic and metabolic effects on the scaling of production and population energy use. Ecology Letters.

PDF Cite Source Document

Morgan Ernest (2003). Life history characteristics of placental nonvolant mammals: ecological archives E084-093. Ecology.

PDF Cite Source Document

Andrew P Allen, Ethan White (2003). Effects of range size on species--area relationships. Evolutionary Ecology Research.

PDF Cite Source Document

Felisa A Smith, S Kathleen Lyons, Morgan Ernest, Kate E Jones, Dawn M Kaufman, Tamar Dayan, Pablo A Marquet, James H Brown, John P Haskell (2003). Body Mass of Late Quaternary Mammals. Ecology.

PDF Cite Dataset Source Document

James H Brown, Morgan Ernest (2002). Rain and Rodents: Complex Dynamics of Desert Consumers. BioScience.

PDF Cite Source Document

Thomas J Valone, Shawn E Nordell, Morgan Ernest (2002). Effects of fire and grazing on an arid grassland ecosystem. The Southwestern Naturalist.

PDF Cite Source Document

James H Brown, Morgan Ernest, Jennifer M Parody, John P Haskell (2001). Regulation of diversity: maintenance of species richness in changing environments. Oecologia.

PDF Cite Source Document

Morgan Ernest, James H Brown (2001). Homeostasis and compensation: the role of species and resources in ecosystem stability. Ecology.

PDF Cite Source Document

Ethan White, Stanley D Gehrt (2001). Effects of recording media on echolocation data from broadband bat detectors. Wildlife Society Bulletin.

PDF Cite Source Document

Eric L Charnov, JP Haskell, SK Ernest (2001). Density-dependent invariance, dimensionless life-histories and the energy-equivalence rule. Evolutionary Ecology Research.

PDF Cite Source Document

Morgan Ernest, James H Brown (2001). Delayed compensation for missing keystone species by colonization. Science.

PDF Cite Source Document

James H Brown, Thomas G Whitham, Morgan Ernest, Catherine A Gehring (2001). Complex species interactions and the dynamics of ecological systems: long-term experiments. Science.

PDF Cite Source Document

Morgan Ernest, James H Brown, Robert R Parmenter (2000). Rodents, plants, and precipitation: spatial and temporal dynamics of consumers and resources. Oikos.

PDF Cite Source Document

Eric L Charnov, JP Haskell, SK Ernest (2000). Density-dependent invariance, dimensionlesslife-histories and the energy-equivalence rule. Evolutionary Ecology Research.

PDF Cite Source Document

Robert R Parmenter, James W Brunt, Douglas I Moore, Sarah Earnest, New Mexico, Sevilleta Long-Term Ecological Research Program, Centers for Disease Control, Prevention (US) (1993). The hantavirus epidemic in the Southwest: rodent population dynamics and the implications for transmission of hantavirus-associated adult respiratory distress syndrome (HARDS) in the Four Corners region. Sevilleta Long-Term Ecological Research Program, Dept. of Biology~….

PDF Cite Project Source Document

DK Berner, GT Berggren, JP Snow, EP White (1988). Distribution and management of red crown rot of soybean in Louisiana. Applied agricultural research.

Cite

DK Berner, GT Berggren, ME Pace, EP White, JS Gershey, JA Freedman (1986). Red crown rot: Now a major disease of soybeans.

Cite